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1.
Nature ; 628(8008): 664-671, 2024 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-38600377

RESUMEN

Bitter taste sensing is mediated by type 2 taste receptors (TAS2Rs (also known as T2Rs)), which represent a distinct class of G-protein-coupled receptors1. Among the 26 members of the TAS2Rs, TAS2R14 is highly expressed in extraoral tissues and mediates the responses to more than 100 structurally diverse tastants2-6, although the molecular mechanisms for recognizing diverse chemicals and initiating cellular signalling are still poorly understood. Here we report two cryo-electron microscopy structures for TAS2R14 complexed with Ggust (also known as gustducin) and Gi1. Both structures have an orthosteric binding pocket occupied by endogenous cholesterol as well as an intracellular allosteric site bound by the bitter tastant cmpd28.1, including a direct interaction with the α5 helix of Ggust and Gi1. Computational and biochemical studies validate both ligand interactions. Our functional analysis identified cholesterol as an orthosteric agonist and the bitter tastant cmpd28.1 as a positive allosteric modulator with direct agonist activity at TAS2R14. Moreover, the orthosteric pocket is connected to the allosteric site via an elongated cavity, which has a hydrophobic core rich in aromatic residues. Our findings provide insights into the ligand recognition of bitter taste receptors and suggest activities of TAS2R14 beyond bitter taste perception via intracellular allosteric tastants.


Asunto(s)
Colesterol , Espacio Intracelular , Receptores Acoplados a Proteínas G , Gusto , Humanos , Regulación Alostérica/efectos de los fármacos , Sitio Alostérico , Colesterol/química , Colesterol/metabolismo , Colesterol/farmacología , Microscopía por Crioelectrón , Interacciones Hidrofóbicas e Hidrofílicas , Espacio Intracelular/química , Espacio Intracelular/metabolismo , Ligandos , Receptores Acoplados a Proteínas G/agonistas , Receptores Acoplados a Proteínas G/química , Receptores Acoplados a Proteínas G/metabolismo , Receptores Acoplados a Proteínas G/ultraestructura , Reproducibilidad de los Resultados , Gusto/efectos de los fármacos , Gusto/fisiología , Transducina/química , Transducina/metabolismo , Transducina/ultraestructura
2.
Food Chem ; 448: 139135, 2024 Aug 01.
Artículo en Inglés | MEDLINE | ID: mdl-38569405

RESUMEN

The impacts of enzymatically produced acylglycerol and glycerin monostearate on the characteristics of gelatin-stabilized omega-3 emulsions and microcapsules were investigated. Tuna oil was enzymatically produced and the resulting acylglycerol was mixed with tuna oil at 12.5% (w/w) to prepare a novel oil phase. This oil phase was stabilized by gelatin to prepare oil-in-water emulsions and subsequent microcapsules via complex coacervation. The tuna oil with glycerin monostearate (GMS) at 1 and 2% (w/w) were used as controls. Results showed that both acylglycerol and GMS significantly reduced the emulsion droplet size and zeta potential, while increasing the viscoelasticity and stability. The diacylglycerol/monoacylglycerol were involved in the oil/water interfacial layer formation by lowering interfacial tension and increasing droplet surface hydrophobicity. Overall, the changed emulsion properties promoted the complex coacervation and contributed to the formation of microcapsules with improved oxidative stability. Therefore, enzymatically produced acylglycerol can develop high-quality stable omega-3 microencapsulated novel food ingredients.


Asunto(s)
Cápsulas , Emulsiones , Ácidos Grasos Omega-3 , Aceites de Pescado , Gelatina , Emulsiones/química , Cápsulas/química , Gelatina/química , Ácidos Grasos Omega-3/química , Aceites de Pescado/química , Animales , Tamaño de la Partícula , Glicerol/química , Atún , Glicéridos/química , Interacciones Hidrofóbicas e Hidrofílicas , Biocatálisis
3.
Cell Rep ; 43(4): 114066, 2024 Apr 23.
Artículo en Inglés | MEDLINE | ID: mdl-38578823

RESUMEN

In human cells and yeast, an intact "hydrophobic patch" substrate docking site is needed for mitotic cyclin centrosomal localization. A hydrophobic patch mutant (HPM) of the fission yeast mitotic cyclin Cdc13 cannot enter mitosis, but whether this is due to defective centrosomal localization or defective cyclin-substrate docking more widely is unknown. Here, we show that artificially restoring Cdc13-HPM centrosomal localization promotes mitotic entry and increases CDK (cyclin-dependent kinase) substrate phosphorylation at the centrosome and in the cytoplasm. We also show that the S-phase B-cyclin hydrophobic patch is required for centrosomal localization but not for S phase. We propose that the hydrophobic patch is essential for mitosis due to its requirement for the local concentration of cyclin-CDK with CDK substrates and regulators at the centrosome. Our findings emphasize the central importance of the centrosome as a hub coordinating cell-cycle control and explain why the cyclin hydrophobic patch is essential for mitosis.


Asunto(s)
Ciclo Celular , Centrosoma , Ciclina B , Quinasas Ciclina-Dependientes , Mitosis , Proteínas de Schizosaccharomyces pombe , Schizosaccharomyces , Centrosoma/metabolismo , Schizosaccharomyces/metabolismo , Proteínas de Schizosaccharomyces pombe/metabolismo , Quinasas Ciclina-Dependientes/metabolismo , Fosforilación , Proteínas de Ciclo Celular/metabolismo , Proteínas de Ciclo Celular/genética , Interacciones Hidrofóbicas e Hidrofílicas , Humanos
4.
J Chromatogr A ; 1722: 464856, 2024 May 10.
Artículo en Inglés | MEDLINE | ID: mdl-38579610

RESUMEN

Complex mixture analysis requires high-efficiency chromatography columns. Although reversed phase liquid chromatography (RPLC) is the dominant approach for such mixtures, hydrophilic interaction liquid chromatography (HILIC) is an important complement to RPLC by enabling the separation of polar compounds. Chromatography theory predicts that small particles and long columns will yield high efficiency; however, little work has been done to prepare HILIC columns longer than 25 cm packed with sub-2 µm particles. In this work, we tested the slurry packing of 75 cm long HILIC columns with 1.7 µm bridged-ethyl-hybrid amide HILIC particles at 2,100 bar (30,000 PSI). Acetonitrile, methanol, acetone, and water were tested as slurry solvents, with acetonitrile providing the best columns. Slurry concentrations of 50-200 mg/mL were assessed, and while 50-150 mg/mL provided comparable results, the 150 mg/mL columns provided the shortest packing times (9 min). Columns prepared using 150 mg/mL slurries in acetonitrile yielded a reduced minimum plate height (hmin) of 3.3 and an efficiency of 120,000 theoretical plates for acenaphthene, an unretained solute. Para-toluenesulfonic acid produced the lowest hmin of 1.9 and the highest efficiency of 210,000 theoretical plates. These results identify conditions for producing high-efficiency HILIC columns with potential applications to complex mixture analysis.


Asunto(s)
Acetonitrilos , Bencenosulfonatos , Interacciones Hidrofóbicas e Hidrofílicas , Acetonitrilos/química , Cromatografía Liquida/métodos , Cromatografía de Fase Inversa/métodos , Cromatografía de Fase Inversa/instrumentación , Metanol/química , Solventes/química , Acetona/química , Tamaño de la Partícula , Presión , Agua/química
5.
Chem Commun (Camb) ; 60(35): 4671-4674, 2024 Apr 25.
Artículo en Inglés | MEDLINE | ID: mdl-38591695

RESUMEN

Hydrophobic membranes infused with mixed solvents including a low polar solvent and a specific solvent can efficiently separate analytes from blood upon applying a voltage. In contrast, membranes infused with a specific solvent alone show significantly reduced separation efficiencies for blood samples. Infusion of a low polar solvent is of importance for achieving antifouling ability of membranes for biological sample pretreatment.


Asunto(s)
Incrustaciones Biológicas , Interacciones Hidrofóbicas e Hidrofílicas , Membranas Artificiales , Solventes , Solventes/química , Incrustaciones Biológicas/prevención & control , Humanos , Animales
6.
J Chromatogr A ; 1722: 464864, 2024 May 10.
Artículo en Inglés | MEDLINE | ID: mdl-38598890

RESUMEN

In this study, a novel piperidinium-sulfonate based zwitterionic hydrophilic monolith was prepared through thermally initiated co-polymerization of a piperidinium-sulfonate monomer 3-(4-((methacryloyloxy)methyl)-1-methylpiperidin-1-ium-1-yl)propane-1-sulfonate (MAMMPS), and a hydrophilic crosslinker N,N'-methylenebisacrylamide (MBA) using n-propanol and H2O as porogenic system. Satisfactory mechanical and chemical stabilities, good repeatability and high column efficiency (120,000 N/m) were obtained on the optimal monolith. The resulting poly(MAMMPS-co-MBA) monolith showed a typical HILIC retention behavior over an ACN content range between 5 and 95 %. Furthermore, this column exhibited good separation performance for various polar compounds. Compared to quaternary ammonium-sulfonate based zwitterionic hydrophilic monolith, i.e. poly(N,N-dimethyl-N-methacryloxyethyl-N-(3-sulfopropyl)ammonium betaine-co-MBA), the poly(MAMMPS-co-MBA) monolith displayed stronger retention and better selectivity for the tested phenolic and amine compounds at different pH conditions. Finally, this column was applied for the separation of six sulfonamide antibiotics, and the analytical characteristics of the method were evaluated in terms of precision, repeatability, limits of detection (LOD) and quantitation (LOQ). Overall, this study not only developed a novel HILIC monolithic column, but also proved the potential of piperidinium-sulfonate based zwitterionic chemistry as stationary phase, which further increased the structure diversity of zwitterionic HILIC stationary phases.


Asunto(s)
Interacciones Hidrofóbicas e Hidrofílicas , Piperidinas , Piperidinas/aislamiento & purificación , Piperidinas/química , Reproducibilidad de los Resultados , Ácidos Sulfónicos/química , Cromatografía Líquida de Alta Presión/métodos , Cromatografía Liquida/métodos , Acrilamidas/química , Polimerizacion , Acetonitrilos/química
7.
J Chromatogr A ; 1722: 464884, 2024 May 10.
Artículo en Inglés | MEDLINE | ID: mdl-38615558

RESUMEN

The removal of excess bilirubin from blood is of great clinical importance. Reduced graphene oxide (rGO) is often used to efficiently remove bilirubin. However, thin rGO pieces tend to aggregate in the aqueous phase because they are hydrophobic. In this context, we propose an effective strategy based on the chitosan-assisted (CS-assisted) dispersion of rGO to produce high-performance bilirubin-adsorbing microspheres. CS possesses a hydrophobic CH structure, which offers strong hydrophobic interactions with rGO that assist its dispersion, and the large number of hydrophilic sites of CS increases the hydrophilicity of rGO. CS serves as a dispersant in a surfactant-like manner to achieve a homogeneous and stable CS/rGO dispersion by simply and gently stirring CS and rGO in a LiOH/KOH/urea/H2O system. Subsequently, CS/rGO hybrid microspheres were prepared by emulsification. CS ensures blood compatibility as a base material, and the entrapped rGO contributes to mechanical strength and a high adsorption capacity. The CS/rGO microspheres exhibited a high bilirubin adsorption capacity (215.56 mg/g), which is significantly higher than those of the rGO and CS microspheres. The determined mass-transfer factors revealed that the rich pores of the CS/rGO microspheres promote mass transfer during bilirubin adsorption (equilibrium is almost achieved within 30 min). The CS/rGO microspheres are promising candidates for bilirubin removal owing to a combination of high strength, blood compatibility, and high adsorption capacity.


Asunto(s)
Bilirrubina , Quitosano , Grafito , Interacciones Hidrofóbicas e Hidrofílicas , Microesferas , Grafito/química , Quitosano/química , Bilirrubina/química , Bilirrubina/aislamiento & purificación , Bilirrubina/sangre , Adsorción , Humanos
8.
J Chromatogr A ; 1722: 464899, 2024 May 10.
Artículo en Inglés | MEDLINE | ID: mdl-38626542

RESUMEN

Perfluoroalkyl substances (PFAS) are persistent organic pollutants that pose significant risks to human health and the environment. Efficient and selective enrichment of these compounds was crucial for their accurate detection and quantification in complex matrices. Herein, we report a novel magnetic solid-phase extraction (MSPE) method using fluorine-functionalized magnetic amino-microporous organic network (Fe3O4@MONNH2@F7) adsorbent for the efficient enrichment of PFAS from aqueous samples. The core-shell Fe3O4@MONNH2@F7 nanosphere was synthesized, featuring magnetic Fe3O4 nanoparticles as the core and a porous amino-functionalized MONs coating as the shell, which was further modified by fluorination. The synthesized adsorbent material exhibited high specific surface area, hydrophobicity, and abundant fluorine groups, facilitating efficient and selective adsorption of PFAS via electrostatic attraction, hydrophobic-hydrophobic interactions, fluorine-fluorine interactions, π-CF interactions and hydrogen bonding. Furthermore, the MSPE method coupled with ultra-high performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) allowed for the rapid, sensitive, and accurate determination of ultra-trace PFAS in real water samples, human serum, and human follicular fluid. Under optimal conditions, the established MSPE method demonstrated a linear range (2 to 2000 ng L-1), with a correlation coefficient exceeding 0.9977, low limits of detection ranging from 0.54 to 1.47 ng L-1, with a relative standard deviation (RSD) < 9.1%. Additionally, the method showed excellent performance in complex real samples (recovery ratio of 81.7 to 121.6 %). The adsorption mechanism was investigated through kinetic, isotherm, and molecular simulation studies, revealing that the introduction of fluorine groups enhanced the hydrophobic interaction and fluorine-fluorine attraction between the adsorbent and PFAS. This work provides a proof-of-concept strategy for designing adsorbent materials with high efficiency and selectivity by post-modification, which has great potential for the detection and analysis of PFAS in complex samples.


Asunto(s)
Flúor , Fluorocarburos , Nanopartículas de Magnetita , Extracción en Fase Sólida , Espectrometría de Masas en Tándem , Contaminantes Químicos del Agua , Fluorocarburos/química , Fluorocarburos/análisis , Fluorocarburos/aislamiento & purificación , Flúor/química , Extracción en Fase Sólida/métodos , Espectrometría de Masas en Tándem/métodos , Humanos , Contaminantes Químicos del Agua/análisis , Contaminantes Químicos del Agua/química , Contaminantes Químicos del Agua/aislamiento & purificación , Adsorción , Cromatografía Líquida de Alta Presión/métodos , Porosidad , Nanopartículas de Magnetita/química , Interacciones Hidrofóbicas e Hidrofílicas , Límite de Detección
9.
Sci Rep ; 14(1): 9168, 2024 04 22.
Artículo en Inglés | MEDLINE | ID: mdl-38649777

RESUMEN

Fluorinated graphene, a two-dimensional nanomaterial composed of three atomic layers, a central carbon layer sandwiched between two layers of fluorine atoms, has attracted considerable attention across various fields, particularly for its potential use in biomedical applications. Nonetheless, scant effort has been devoted to assessing the potential toxicological implications of this nanomaterial. In this study, we scrutinize the potential impact of fluorinated graphene on a protein model, HP35 by utilizing extensive molecular dynamics (MD) simulation methods. Our MD results elucidate that upon adsorption to the nanomaterial, HP35 undergoes a denaturation process initiated by the unraveling of the second helix of the protein and the loss of the proteins hydrophobic core. In detail, substantial alterations in various structural features of HP35 ensue, including alterations in hydrogen bonding, Q value, and RMSD. Subsequent analyses underscore that hydrophobic and van der Waals interactions (predominant), alongside electrostatic energy (subordinate), exert influence over the adsorption of HP35 on the fluorinated graphene surface. Mechanistic scrutiny attests that the unrestrained lateral mobility of HP35 on the fluorinated graphene nanomaterial primarily causes the exposure of HP35's hydrophobic core, resulting in the eventual structural denaturation of HP35. A trend in the features of 2D nanostructures is proposed that may facilitate the denaturation process. Our findings not only substantiate the potential toxicity of fluorinated graphene but also unveil the underlying molecular mechanism, which thereby holds significance for the prospective utilization of such nanomaterials in the field of biomedicine.


Asunto(s)
Grafito , Enlace de Hidrógeno , Simulación de Dinámica Molecular , Proteínas de Neurofilamentos , Fragmentos de Péptidos , Conformación Proteica en Hélice alfa , Grafito/química , Grafito/toxicidad , Interacciones Hidrofóbicas e Hidrofílicas , Desplegamiento Proteico/efectos de los fármacos , Halogenación , Adsorción , Nanoestructuras/química , Nanoestructuras/toxicidad
10.
Food Res Int ; 185: 114288, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38658074

RESUMEN

In this paper, the effect of monosodium glutamate (MSG) on coconut protein (CP) solubility, surface hydrophobicity, emulsification activity, ultraviolet spectroscopy and fluorescence spectroscopy was investigated. Meanwhile, the changes in the in vitro digestive properties of coconut milk were also further analyzed. MSG treatment altered the solubility and surface hydrophobicity of CP, thereby improving protein digestibility. Molecular docking showed that CP bound to pepsin and trypsin mainly through hydrogen bonds and salt bridges. And MSG increased the cleavable sites of pepsin and trypsin on CP, thus further improving the protein digestibility. In addition, MSG increased the Na+ concentration in coconut milk, promoted flocculation and aggregation between coconut milk droplets, which prevented the binding of lipase and oil droplets and inhibited lipid digestion. These findings may provide new ideas and insights to improve the digestive properties of plant-based milk.


Asunto(s)
Cocos , Digestión , Interacciones Hidrofóbicas e Hidrofílicas , Simulación del Acoplamiento Molecular , Proteínas de Plantas , Glutamato de Sodio , Solubilidad , Glutamato de Sodio/química , Digestión/efectos de los fármacos , Cocos/química , Proteínas de Plantas/química , Tripsina/metabolismo , Tripsina/química , Pepsina A/metabolismo , Pepsina A/química
11.
Nanoscale ; 16(16): 8074-8089, 2024 Apr 25.
Artículo en Inglés | MEDLINE | ID: mdl-38563405

RESUMEN

Amyloid aggregation is implicated in the pathogenesis of various neurodegenerative disorders, such as Alzheimer's disease (AD) and Parkinson's disease (PD). It is critical to develop high-performance drugs to combat amyloid-related diseases. Most identified nanomaterials exhibit limited biocompatibility and therapeutic efficacy. In this work, we used a solvent-free carbonization process to prepare new photo-responsive carbon nanodots (CNDs). The surface of the CNDs is densely packed with chemical groups. CNDs with large, conjugated domains can interact with proteins through π-π stacking and hydrophobic interactions. Furthermore, CNDs possess the ability to generate singlet oxygen species (1O2) and can be used to oxidize amyloid. The hydrophobic interaction and photo-oxidation can both influence amyloid aggregation and disaggregation. Thioflavin T (ThT) fluorescence analysis and circular dichroism (CD) spectroscopy indicate that CNDs can block the transition of amyloid from an α-helix structure to a ß-sheet structure. CNDs demonstrate efficacy in alleviating cytotoxicity induced by Aß42 and exhibit promising blood-brain barrier (BBB) permeability. CNDs have small size, low biotoxicity, good fluorescence and photocatalytic properties, and provide new ideas for the diagnosis and treatment of amyloid-related diseases.


Asunto(s)
Péptidos beta-Amiloides , Carbono , Carbono/química , Péptidos beta-Amiloides/metabolismo , Péptidos beta-Amiloides/química , Humanos , Catálisis , Oxígeno Singlete/metabolismo , Oxígeno Singlete/química , Barrera Hematoencefálica/metabolismo , Animales , Agregado de Proteínas/efectos de los fármacos , Puntos Cuánticos/química , Amiloide/química , Amiloide/metabolismo , Supervivencia Celular/efectos de los fármacos , Fragmentos de Péptidos/química , Fragmentos de Péptidos/metabolismo , Interacciones Hidrofóbicas e Hidrofílicas
12.
Sci Rep ; 14(1): 8637, 2024 04 15.
Artículo en Inglés | MEDLINE | ID: mdl-38622241

RESUMEN

Rapid mixing and precise timing are key for accurate biomedical assay measurement, particularly when the result is determined as the rate of a reaction: for example rapid immunoassay in which the amount of captured target is kinetically determined; determination of the concentration of an enzyme or enzyme substrate; or as the final stage in any procedure that involves a capture reagent when an enzyme reaction is used as the indicator. Rapid mixing and precise timing are however difficult to achieve in point-of-care devices designed for small sample volumes and fast time to result. By using centrifugal microfluidics and transposing the reaction surface from a chamber to a single mm-scale bead we demonstrate an elegant and easily manufacturable solution. Reagents (which may be, for example, an enzyme, enzyme substrate, antibody or antigen) are immobilised on the surface of a single small bead (typically 1-2 mm in diameter) contained in a cylindrical reaction chamber subjected to periodically changing rotational accelerations which promote both mixing and uniform mass-transfer to the bead surface. The gradient of Euler force across the chamber resulting from rotational acceleration of the disc, dΩdisc/dt, drives circulation of fluid in the chamber. Oscillation of Euler force by oscillation of rotational acceleration with period, T, less than that of the hydrodynamic relaxation time of the fluid, folds the fluid streamlines. Movement of the bead in response to the fluid and the changing rotational acceleration provides a dynamically changing chamber shape, further folding and expanding the fluid. Bead rotation and translation driven by fluid flow and disc motion give uniformity of reaction over the surface. Critical parameters for mixing and reaction uniformity are the ratio of chamber radius to bead radius, rchamber/rbead, and the product Trchamber(dΩdisc/dt), of oscillation period and Euler force gradient across the fluid. We illustrate application of the concept using the reaction of horse radish peroxidase (HRP) immobilised on the bead surface with its substrate tetramethylbenzidine (TMB) in solution. Acceleration from rest to break a hydrophobic valve provided precise timing for TMB contact with the bead. Solution uniformity from reaction on the surface of the bead in volumes 20-50 uL was obtained in times of 2.5 s or less. Accurate measurement of the amount of surface-bound HRP by model fitting to the measured kinetics of colour development at 10 s intervals is demonstrated.


Asunto(s)
Anticuerpos , Microfluídica , Microfluídica/métodos , Antígenos , Sistemas de Atención de Punto , Interacciones Hidrofóbicas e Hidrofílicas
13.
Protein Sci ; 33(5): e4986, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38607226

RESUMEN

Despite the generally accepted role of the hydrophobic effect as the driving force for folding, many intrinsically disordered proteins (IDPs), including those with hydrophobic content typical of foldable proteins, behave nearly as self-avoiding random walks (SARWs) under physiological conditions. Here, we tested how temperature and ionic conditions influence the dimensions of the N-terminal domain of pertactin (PNt), an IDP with an amino acid composition typical of folded proteins. While PNt contracts somewhat with temperature, it nevertheless remains expanded over 10-58°C, with a Flory exponent, ν, >0.50. Both low and high ionic strength also produce contraction in PNt, but this contraction is mitigated by reducing charge segregation. With 46% glycine and low hydrophobicity, the reduced form of snow flea anti-freeze protein (red-sfAFP) is unaffected by temperature and ionic strength and persists as a near-SARW, ν ~ 0.54, arguing that the thermal contraction of PNt is due to stronger interactions between hydrophobic side chains. Additionally, red-sfAFP is a proxy for the polypeptide backbone, which has been thought to collapse in water. Increasing the glycine segregation in red-sfAFP had minimal effect on ν. Water remained a good solvent even with 21 consecutive glycine residues (ν > 0.5), and red-sfAFP variants lacked stable backbone hydrogen bonds according to hydrogen exchange. Similarly, changing glycine segregation has little impact on ν in other glycine-rich proteins. These findings underscore the generality that many disordered states can be expanded and unstructured, and that the hydrophobic effect alone is insufficient to drive significant chain collapse for typical protein sequences.


Asunto(s)
Proteínas Intrínsecamente Desordenadas , Pliegue de Proteína , Agua/química , Cloruro de Sodio , Glicina/química , Interacciones Hidrofóbicas e Hidrofílicas
14.
Food Chem ; 448: 139208, 2024 Aug 01.
Artículo en Inglés | MEDLINE | ID: mdl-38608400

RESUMEN

(-)-Epigallocatechin-3-gallate (EGCG) is remarkably efficacious in inhibiting the browning of red meat. We therefore propose a hypothesis that EGCG forms complexes with myoglobin, thereby stabilizing its structure and thus preventing browning. This study investigated the interaction mechanism between EGCG and myoglobin. EGCG induced static quenching of myoglobin. Noncovalent forces, including hydrogen bonds and van der Waals, primarily governing the interactions between myoglobin and EGCG. The interactions primarily disrupted myoglobin's secondary structure, thus significantly reducing surface hydrophobicity by 53% (P < 0.05). The modification augmented the solubility and thermal stability of myoglobin. The radius of gyration (Rg) value fluctuated between 1.47 and 1.54 nm, and the hydroxyl groups in EGCG formed an average of 2.93 hydrogen bonds with myoglobin. Our findings elucidated the formation of stable myoglobin-EGCG complexes and the myoglobin-EGCG interaction, thus confirming our initial hypothesis.


Asunto(s)
Catequina , Catequina/análogos & derivados , Interacciones Hidrofóbicas e Hidrofílicas , Mioglobina , Mioglobina/química , Catequina/química , Enlace de Hidrógeno , Animales , Unión Proteica
15.
J Phys Chem Lett ; 15(16): 4408-4415, 2024 Apr 25.
Artículo en Inglés | MEDLINE | ID: mdl-38625684

RESUMEN

Probing protein-membrane interactions is vital for understanding biological functionality for various applications such as drug development, targeted drug delivery, and creation of functional biomaterials for medical and industrial purposes. In this study, we have investigated interaction of Human Serum Albumin (HSA) with two different lipids, dipalmitoylphosphatidylglycerol (dDPPG) and dipalmitoylphosphatidylcholine (dDPPC), using Vibrational Sum Frequency Generation spectroscopy at different membrane fluidity values. In the liquid-expanded (LE) state of the lipid, HSA (at pH 3.5) deeply intercalated lipid chains through a combination of electrostatic and hydrophobic interactions, which resulted in more ordering of the lipid chains. However, in the liquid-condensed (LC) state, protein intercalation is decreased due to tighter lipid packing. Moreover, our findings revealed distinct differences in HSA's interaction with dDPPG and dDPPC lipids. The interaction with dDPPC remained relatively weak compared to dDPPG. These results shed light on the significance of protein mediated changes in lipid characteristics, which hold considerable implications for understanding membrane protein behavior, lipid-mediated cellular processes, and lipid-based biomaterial design.


Asunto(s)
1,2-Dipalmitoilfosfatidilcolina , Fluidez de la Membrana , Fosfatidilgliceroles , Humanos , Fosfatidilgliceroles/química , Fosfatidilgliceroles/metabolismo , 1,2-Dipalmitoilfosfatidilcolina/química , Interacciones Hidrofóbicas e Hidrofílicas , Albúmina Sérica Humana/química , Albúmina Sérica Humana/metabolismo , Electricidad Estática
16.
J Phys Chem B ; 128(16): 3919-3928, 2024 Apr 25.
Artículo en Inglés | MEDLINE | ID: mdl-38628066

RESUMEN

The surface hydration diffusivity of Bacillus subtilis Lipase A (BSLA) has been characterized by low-field Overhauser dynamic nuclear polarization (ODNP) relaxometry using a series of spin-labeled constructs. Sites for spin-label incorporation were previously designed via an atomistic computational approach that screened for surface exposure, reflective of the surface hydration comparable to other proteins studied by this method, as well as minimal impact on protein function, dynamics, and structure of BSLA by excluding any surface site that participated in greater than 30% occupancy of a hydrogen bonding network within BSLA. Experimental ODNP relaxometry coupling factor results verify the overall surface hydration behavior for these BSLA spin-labeled sites similar to other globular proteins. Here, by plotting the ODNP parameters of relative diffusive water versus the relative bound water, we introduce an effective "phase-space" analysis, which provides a facile visual comparison of the ODNP parameters of various biomolecular systems studied to date. We find notable differences when comparing BSLA to other systems, as well as when comparing different clusters on the surface of BSLA. Specifically, we find a grouping of sites that correspond to the spin-label surface location within the two main hydrophobic core clusters of the branched aliphatic amino acids isoleucine, leucine, and valine cores observed in the BSLA crystal structure. The results imply that hydrophobic clustering may dictate local surface hydration properties, perhaps through modulation of protein conformations and samplings of the unfolded states, providing insights into how the dynamics of the hydration shell is coupled to protein motion and fluctuations.


Asunto(s)
Bacillus subtilis , Interacciones Hidrofóbicas e Hidrofílicas , Lipasa , Agua , Bacillus subtilis/enzimología , Lipasa/química , Lipasa/metabolismo , Agua/química , Simulación de Dinámica Molecular , Propiedades de Superficie , Proteínas Bacterianas/química , Proteínas Bacterianas/metabolismo , Enlace de Hidrógeno
17.
Food Chem ; 448: 139167, 2024 Aug 01.
Artículo en Inglés | MEDLINE | ID: mdl-38574718

RESUMEN

Cyclodextrin-based metal-organic framework (CD-MOF) has been widely used in various delivery systems due to its excellent edibility and high drug loading capacity. However, its typically bulky size and high brittleness in aqueous solutions pose significant challenges for practical applications. Here, we proposed an ultrasonic-assisted method for rapid synthesis of uniformly-sized nanoscale CD-MOF, followed by its hydrophobic modification through ester bond cross-linking (Nano-CMOF). Proper ultrasound treatment effectively reduced particle size to nanoscale (393.14 nm). Notably, carbonate ester cross-linking method significantly improved water stability without altering its cubic shape and high porosity (1.3 cm3/g), resulting in a retention rate exceeding 90% in various media. Furthermore, the loading of quercetin did not disrupt cubic structure and showcased remarkable storage stability. Nano-CMOF achieved controlled release of quercetin in both aqueous environments and digestion. Additionally, Nano-CMOF demonstrated exceptional antioxidant (free radical scavenging 82.27%) and biocompatibility, indicating its significant potential as novel nutritional delivery systems in food and biomedical fields.


Asunto(s)
Ciclodextrinas , Preparaciones de Acción Retardada , Portadores de Fármacos , Interacciones Hidrofóbicas e Hidrofílicas , Estructuras Metalorgánicas , Quercetina , Quercetina/química , Estructuras Metalorgánicas/química , Ciclodextrinas/química , Portadores de Fármacos/química , Preparaciones de Acción Retardada/química , Nanopartículas/química , Materiales Biocompatibles/química , Tamaño de la Partícula , Humanos , Estabilidad de Medicamentos
18.
Environ Int ; 186: 108625, 2024 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-38593690

RESUMEN

The potential of microplastics to act as a vector for anthropogenic contaminants is of rising concern. However, directly quantitatively determining the vector effects of microplastics has been rarely studied. Here, we present a dual-dosing method that simulates the chemical bioaccumulation from soil and microplastics simultaneously, wherein unlabeled hydrophobic organic contaminants (HOCs) were spiked in the soil and their respective isotope-labeled reference compounds were spiked on the polyethylene microplastics. The comparison of the bioavailability, i.e., the freely dissolved concentration in soil porewater and bioaccumulation by earthworm, between the unlabeled and isotope-labeled HOCs was carried out. Relatively higher level of bioavailability of the isotope-labeled HOCs was observed compared to the unlabeled HOCs, which may be attributed to the irreversible desorption of HOCs from soil particles. The average relative fractions of bioaccumulated isotope-labeled HOCs in the soil treated with 1 % microplastics ranged from 6.9 % to 46.4 %, which were higher than those in the soil treated with 0.1 % microplastics. Treatments with the smallest microplastic particles were observed to have the highest relative fractions of bioaccumulated isotope-labeled HOCs, with the exception of phenanthrene, suggesting greater vector effects of smaller microplastic particles. Biodynamic model analysis indicated that the contribution of dermal uptake to the bioaccumulation of isotope-labeled HOCs was higher than that for unlabeled HOCs. This proposed method can be used as a tool to assess the prospective vector effects of microplastics in complex environmental conditions and would enhance the comprehensive understanding of the microplastic vector effects for HOC bioaccumulation.


Asunto(s)
Bioacumulación , Interacciones Hidrofóbicas e Hidrofílicas , Microplásticos , Oligoquetos , Contaminantes del Suelo , Oligoquetos/metabolismo , Animales , Contaminantes del Suelo/metabolismo , Suelo/química
19.
J Agric Food Chem ; 72(15): 8774-8783, 2024 Apr 17.
Artículo en Inglés | MEDLINE | ID: mdl-38587054

RESUMEN

Proteins can be adsorbed on the air-water interface (AWI), and the structural changes in proteins at the AWI are closely related to the foaming properties of foods and beverages. However, how these structural changes in proteins at the AWI occur is not well understood. We developed a method for the structural assessment of proteins in the foam state using hydrogen/deuterium exchange mass spectrometry. Adsorption sites and structural changes in human serum albumin (HSA) were identified in situ at the peptide-level resolution. The N-terminus and the loop (E492-T506), which contains hydrophobic amino acids, were identified as adsorption sites. Both the structural flexibility and hydrophobicity were considered to be critical factors for the adsorption of HSA at the AWI. Structural changes in HSA were observed after more than one minute of foaming and were spread widely throughout the structure. These structural changes at the foam AWI were reversible.


Asunto(s)
Proteínas , Albúmina Sérica Humana , Humanos , Proteínas/química , Interacciones Hidrofóbicas e Hidrofílicas , Adsorción , Propiedades de Superficie
20.
J Chromatogr A ; 1719: 464754, 2024 Mar 29.
Artículo en Inglés | MEDLINE | ID: mdl-38428340

RESUMEN

Aviation turbine fuel is a complex mixture of thousands of compounds. An analytical method using hydrophilic interaction liquid chromatography (HILIC) coupled with electrospray ionization and quadrupole time-of-flight mass spectrometry (ESI-QTOF) was developed for the identification of heteroatomic, polar compounds in aviation turbine fuel. Although compounds containing oxygen, nitrogen, and sulfur functional groups are each found at low levels (<0.1 % by mass) in fuels, their presence can generate significant effects on fuel properties. The HILIC-ESI-QTOF method is a combined separation and detection technique that possesses many advantages including a fast and simple sample preparation-requiring no extraction step therefore ensuring no loss of compounds of interest-and the ability to acquire high-fidelity compound data for chemometric analysis of heteroatomic species in aviation turbine fuel. In the development of the method, it was found that the chromatographic conditions and nature of the injection sample had a significant effect on separation efficiency and repeatability. For a sample dataset optimized using a singular aviation turbine fuel, retention time shift was able to be reduced from 0.4 min to 2.0 % relative standard deviation (RSD) to approximately 0.1 min with RSD of 0.4 % using the newly developed method. In addition, a high number of untargeted molecular features (944) and targeted amines (121) were able to be identified when utilizing optimal method conditions. The specific benefits and limitations of utilizing HILIC techniques with HPLC-ESI-QTOF are also discussed herein. This new method is currently being expanded to include analysis of all heteroatoms and is being applied to real fuel sets. The results of these studies are forthcoming.


Asunto(s)
Aviación , Espectrometría de Masa por Ionización de Electrospray , Espectrometría de Masa por Ionización de Electrospray/métodos , Cromatografía Líquida de Alta Presión/métodos , Cromatografía Liquida/métodos , Interacciones Hidrofóbicas e Hidrofílicas
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